Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 AC010203.1-204ENST00000548782 407 ntBASIC16.89■□□□□ 0.29
CD53P19397 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.89■□□□□ 0.29
CD53P19397 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CD53P19397 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 AL031985.4-201ENST00000642138 673 ntBASIC16.89■□□□□ 0.29
CD53P19397 AL133373.2-201ENST00000623187 2828 ntBASIC16.89■□□□□ 0.29
CD53P19397 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD53P19397 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD53P19397 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.89■□□□□ 0.29
CD53P19397 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.88■□□□□ 0.29
CD53P19397 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.88■□□□□ 0.29
CD53P19397 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 AC011270.2-201ENST00000624293 2550 ntBASIC16.88■□□□□ 0.29
CD53P19397 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.88■□□□□ 0.29
CD53P19397 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CD53P19397 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.88■□□□□ 0.29
CD53P19397 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD53P19397 AP000997.3-201ENST00000623333 2250 ntBASIC16.87■□□□□ 0.29
CD53P19397 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.87■□□□□ 0.29
CD53P19397 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.87■□□□□ 0.29
CD53P19397 AC018470.1-201ENST00000624790 3129 ntBASIC16.87■□□□□ 0.29
CD53P19397 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CD53P19397 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 LIN28AP1-201ENST00000429574 405 ntBASIC16.87■□□□□ 0.29
CD53P19397 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD53P19397 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.87■□□□□ 0.29
CD53P19397 WWOX-216ENST00000569818 525 ntBASIC16.87■□□□□ 0.29
CD53P19397 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.87■□□□□ 0.29
CD53P19397 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CD53P19397 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CD53P19397 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD53P19397 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.86■□□□□ 0.29
CD53P19397 FSCN1P1-201ENST00000568912 1481 ntBASIC16.86■□□□□ 0.29
CD53P19397 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CD53P19397 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.86■□□□□ 0.29
CD53P19397 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.86■□□□□ 0.29
CD53P19397 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.86■□□□□ 0.29
CD53P19397 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD53P19397 MESTP1-201ENST00000404287 994 ntBASIC16.86■□□□□ 0.29
CD53P19397 ATP5G1P1-201ENST00000448724 379 ntBASIC16.86■□□□□ 0.29
CD53P19397 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.86■□□□□ 0.29
CD53P19397 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms