Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RARAP10276 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.53■□□□□ 0.72
RARAP10276 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.53■□□□□ 0.72
RARAP10276 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.53■□□□□ 0.72
RARAP10276 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RARAP10276 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.53■□□□□ 0.72
RARAP10276 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RARAP10276 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
RARAP10276 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.52■□□□□ 0.72
RARAP10276 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RARAP10276 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 CRYGFP-201ENST00000418459 633 ntBASIC19.52■□□□□ 0.72
RARAP10276 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.52■□□□□ 0.72
RARAP10276 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.52■□□□□ 0.72
RARAP10276 AL357033.4-201ENST00000617703 1807 ntBASIC19.52■□□□□ 0.72
RARAP10276 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RARAP10276 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.52■□□□□ 0.72
RARAP10276 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RARAP10276 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RARAP10276 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.52■□□□□ 0.71
RARAP10276 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RARAP10276 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RARAP10276 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.52■□□□□ 0.71
RARAP10276 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RARAP10276 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RARAP10276 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RARAP10276 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.51■□□□□ 0.71
RARAP10276 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RARAP10276 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 AP006294.2-201ENST00000641667 209 ntBASIC19.51■□□□□ 0.71
RARAP10276 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RARAP10276 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.51■□□□□ 0.71
RARAP10276 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.51■□□□□ 0.71
RARAP10276 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RARAP10276 FZD10-202ENST00000539839 3282 ntBASIC19.5■□□□□ 0.71
RARAP10276 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RARAP10276 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
RARAP10276 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RARAP10276 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.5■□□□□ 0.71
RARAP10276 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
RARAP10276 RBM17P1-201ENST00000453646 1190 ntBASIC19.5■□□□□ 0.71
RARAP10276 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.5■□□□□ 0.71
RARAP10276 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RARAP10276 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
RARAP10276 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RARAP10276 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.5■□□□□ 0.71
RARAP10276 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.5■□□□□ 0.71
RARAP10276 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RARAP10276 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 AL162741.1-201ENST00000565563 1558 ntBASIC19.49■□□□□ 0.71
RARAP10276 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
RARAP10276 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.49■□□□□ 0.71
RARAP10276 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RARAP10276 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms