Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 KRT18P41-201ENST00000518924 1277 ntBASIC16.92■□□□□ 0.3
CCL3P10147 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
CCL3P10147 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 AC116407.4-201ENST00000623319 1061 ntBASIC16.92■□□□□ 0.3
CCL3P10147 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL3P10147 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL3P10147 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL3P10147 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL3P10147 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCL3P10147 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL3P10147 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL3P10147 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL3P10147 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL3P10147 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL3P10147 AL645929.1-201ENST00000420084 975 ntBASIC16.91■□□□□ 0.3
CCL3P10147 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.91■□□□□ 0.3
CCL3P10147 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL3P10147 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL3P10147 MIR3180-4-201ENST00000582223 153 ntBASIC16.91■□□□□ 0.3
CCL3P10147 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL3P10147 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL3P10147 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL3P10147 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL3P10147 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL3P10147 AL499627.1-201ENST00000569373 2188 ntBASIC16.91■□□□□ 0.3
CCL3P10147 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CCL3P10147 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCL3P10147 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL3P10147 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL3P10147 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 AP000593.1-201ENST00000393668 712 ntBASIC16.9■□□□□ 0.3
CCL3P10147 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCL3P10147 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL3P10147 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.9■□□□□ 0.3
CCL3P10147 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL3P10147 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL3P10147 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL3P10147 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCL3P10147 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL3P10147 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL3P10147 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCL3P10147 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL3P10147 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 AC099343.3-201ENST00000605834 2503 ntBASIC16.89■□□□□ 0.29
CCL3P10147 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL3P10147 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.89■□□□□ 0.29
CCL3P10147 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCL3P10147 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCL3P10147 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCL3P10147 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL3P10147 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL3P10147 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCL3P10147 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL3P10147 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL3P10147 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL3P10147 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL3P10147 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL3P10147 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL3P10147 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL3P10147 PVRIG2P-201ENST00000435460 978 ntBASIC16.88■□□□□ 0.29
CCL3P10147 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL3P10147 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms