Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.13■□□□□ 0.97
TPM2P07951 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 TUBB8P6-201ENST00000436895 1288 ntBASIC21.13■□□□□ 0.97
TPM2P07951 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.13■□□□□ 0.97
TPM2P07951 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.13■□□□□ 0.97
TPM2P07951 PNMA6B-201ENST00000538162 1200 ntBASIC21.13■□□□□ 0.97
TPM2P07951 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.13■□□□□ 0.97
TPM2P07951 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.13■□□□□ 0.97
TPM2P07951 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.13■□□□□ 0.97
TPM2P07951 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TPM2P07951 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TPM2P07951 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM2P07951 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM2P07951 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC21.12■□□□□ 0.97
TPM2P07951 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.12■□□□□ 0.97
TPM2P07951 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM2P07951 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM2P07951 TSPY6P-201ENST00000448518 926 ntBASIC21.12■□□□□ 0.97
TPM2P07951 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.12■□□□□ 0.97
TPM2P07951 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
TPM2P07951 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TPM2P07951 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM2P07951 FP475955.4-201ENST00000623131 1990 ntBASIC21.12■□□□□ 0.97
TPM2P07951 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
TPM2P07951 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC21.12■□□□□ 0.97
TPM2P07951 CICP6-201ENST00000457191 2729 ntBASIC21.12■□□□□ 0.97
TPM2P07951 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM2P07951 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TPM2P07951 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.12■□□□□ 0.97
TPM2P07951 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TPM2P07951 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TPM2P07951 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 SDHAP1-207ENST00000440850 2000 ntBASIC21.11■□□□□ 0.97
TPM2P07951 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TPM2P07951 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.11■□□□□ 0.97
TPM2P07951 NCF1B-203ENST00000435988 1254 ntBASIC21.11■□□□□ 0.97
TPM2P07951 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.11■□□□□ 0.97
TPM2P07951 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.11■□□□□ 0.97
TPM2P07951 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.11■□□□□ 0.97
TPM2P07951 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TPM2P07951 IRX1P1-201ENST00000438849 1838 ntBASIC21.11■□□□□ 0.97
TPM2P07951 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TPM2P07951 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TPM2P07951 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TPM2P07951 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TPM2P07951 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
TPM2P07951 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
TPM2P07951 AL118508.1-201ENST00000613502 2345 ntBASIC21.1■□□□□ 0.97
TPM2P07951 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TPM2P07951 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.1■□□□□ 0.97
TPM2P07951 AC120498.8-201ENST00000614275 531 ntBASIC21.1■□□□□ 0.97
TPM2P07951 AL121829.2-201ENST00000620908 328 ntBASIC21.1■□□□□ 0.97
TPM2P07951 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TPM2P07951 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms