Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TSPAN3O60637 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 HOXB1-202ENST00000577092 1414 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 AC138932.1-201ENST00000534164 6830 ntBASIC19.15■□□□□ 0.66
TSPAN3O60637 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN3O60637 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN3O60637 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.14■□□□□ 0.66
TSPAN3O60637 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.14■□□□□ 0.66
TSPAN3O60637 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.66
TSPAN3O60637 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN3O60637 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 HBZP1-201ENST00000354915 429 ntBASIC19.14■□□□□ 0.65
TSPAN3O60637 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 SPDYE13P-201ENST00000445314 798 ntBASIC19.14■□□□□ 0.65
TSPAN3O60637 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.14■□□□□ 0.65
TSPAN3O60637 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.14■□□□□ 0.65
TSPAN3O60637 AP000550.4-202ENST00000639755 178 ntBASIC19.14■□□□□ 0.65
TSPAN3O60637 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 IER3-202ENST00000376377 1350 ntBASIC19.14■□□□□ 0.65
TSPAN3O60637 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN3O60637 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN3O60637 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN3O60637 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN3O60637 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TSPAN3O60637 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.13■□□□□ 0.65
TSPAN3O60637 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.13■□□□□ 0.65
TSPAN3O60637 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.13■□□□□ 0.65
TSPAN3O60637 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.13■□□□□ 0.65
TSPAN3O60637 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN3O60637 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN3O60637 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN3O60637 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.13■□□□□ 0.65
TSPAN3O60637 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 KRT8P7-201ENST00000533003 1432 ntBASIC19.12■□□□□ 0.65
TSPAN3O60637 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TSPAN3O60637 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.12■□□□□ 0.65
TSPAN3O60637 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.12■□□□□ 0.65
TSPAN3O60637 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN3O60637 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms