Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EML3-216ENST00000529309 2909 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
NDUFA1O15239 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.73□□□□□ -0.37
NDUFA1O15239 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 AC009053.2-201ENST00000563701 2365 ntBASIC12.73□□□□□ -0.37
NDUFA1O15239 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFA1O15239 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFA1O15239 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFA1O15239 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.73□□□□□ -0.37
NDUFA1O15239 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.73□□□□□ -0.37
NDUFA1O15239 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 AC124283.5-201ENST00000624661 1809 ntBASIC12.73□□□□□ -0.37
NDUFA1O15239 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFA1O15239 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
NDUFA1O15239 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFA1O15239 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.72□□□□□ -0.37
NDUFA1O15239 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.72□□□□□ -0.37
NDUFA1O15239 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 TUBB8P6-201ENST00000436895 1288 ntBASIC12.72□□□□□ -0.37
NDUFA1O15239 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.72□□□□□ -0.37
NDUFA1O15239 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 AC060766.5-201ENST00000590539 871 ntBASIC12.72□□□□□ -0.37
NDUFA1O15239 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.72□□□□□ -0.37
NDUFA1O15239 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.72□□□□□ -0.37
NDUFA1O15239 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NDUFA1O15239 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NDUFA1O15239 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFA1O15239 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
NDUFA1O15239 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFA1O15239 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFA1O15239 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms