Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC034236.2-201ENST00000606662 1610 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 MYLKP1-201ENST00000509077 1580 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC25A1P2-201ENST00000430693 912 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AP003071.4-201ENST00000562276 1284 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 Z99916.2-201ENST00000604037 246 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC008622.2-201ENST00000617006 1229 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 TMEM191A-211ENST00000637163 1067 ntBASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV6-4A0A1B0GX49 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 GPAT2P1-201ENST00000444924 1672 ntBASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 MIR3180-5-201ENST00000583743 153 ntBASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL499627.1-201ENST00000569373 2188 ntBASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL390961.4-201ENST00000623958 2535 ntBASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms