Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRT8P11-201ENST00000409686 1436 ntBASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRT8P32-201ENST00000512863 1461 ntBASIC15.58■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC012317.2-201ENST00000623305 2251 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 PCDHA12-202ENST00000613593 2588 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRASP1-201ENST00000407852 552 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC239809.2-201ENST00000415381 517 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 PRSS44-201ENST00000515154 1146 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL023875.1-201ENST00000640777 796 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 KRT8P3-201ENST00000519669 1449 ntBASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRBV6-7A0A0A0MS04 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 RNA5SP413-201ENST00000516373 109 ntBASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC090192.1-201ENST00000517740 490 ntBASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC092666.2-201ENST00000613287 246 ntBASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 AC131212.4-201ENST00000623606 975 ntBASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 MYC-208ENST00000641036 567 ntBASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-7A0A0A0MS04 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-7A0A0A0MS04 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms