Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DDX49Q9Y6V7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
DDX49Q9Y6V7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 KRT18P16-201ENST00000510337 1294 ntBASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC22.33■■□□□ 1.17
DDX49Q9Y6V7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
DDX49Q9Y6V7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
DDX49Q9Y6V7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DDX49Q9Y6V7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
DDX49Q9Y6V7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
DDX49Q9Y6V7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 INGX-201ENST00000359239 846 ntBASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
DDX49Q9Y6V7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 AC004980.1-204ENST00000429707 299 ntBASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 AC008040.2-201ENST00000461049 708 ntBASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 KRT18P35-201ENST00000510488 1269 ntBASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
DDX49Q9Y6V7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
DDX49Q9Y6V7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms