Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLDN16Q9Y5I7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 AC112907.2-201ENST00000448639 330 ntBASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 AC083849.1-201ENST00000615227 514 ntBASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
CLDN16Q9Y5I7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 AC099343.3-201ENST00000605834 2503 ntBASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 SDHAP2-201ENST00000455183 2001 ntBASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 HBZP1-201ENST00000354915 429 ntBASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 AC092647.4-201ENST00000457211 535 ntBASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 AC034232.1-201ENST00000506026 1064 ntBASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDN16Q9Y5I7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 WIZP1-201ENST00000531444 2299 ntBASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 HLA-F-220ENST00000434407 884 ntBASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDN16Q9Y5I7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN16Q9Y5I7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.27■□□□□ 0.35
CLDN16Q9Y5I7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDN16Q9Y5I7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 LINC01238-205ENST00000567549 1107 ntBASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 AC073592.3-201ENST00000625118 1834 ntBASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN16Q9Y5I7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms