Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 AC073592.3-201ENST00000625118 1834 ntBASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 AL023973.1-201ENST00000624619 620 ntBASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 AC005082.1-201ENST00000413042 2259 ntBASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA4Q9UN74 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA4Q9UN74 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 GCSHP2-201ENST00000560971 527 ntBASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 AC139887.4-201ENST00000607877 719 ntBASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHA4Q9UN74 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AC117947.1-201ENST00000427448 529 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 RN7SL850P-201ENST00000579959 291 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AC140113.3-201ENST00000605663 199 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AC006011.2-201ENST00000621313 1158 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AL031432.5-201ENST00000641059 760 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 AL163051.1-201ENST00000569214 1512 ntBASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHA4Q9UN74 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHA4Q9UN74 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms