Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.03■□□□□ 0.8
CNTN3Q9P232 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CNTN3Q9P232 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 AL645929.1-201ENST00000420084 975 ntBASIC20.02■□□□□ 0.8
CNTN3Q9P232 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.02■□□□□ 0.8
CNTN3Q9P232 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CNTN3Q9P232 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
CNTN3Q9P232 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTN3Q9P232 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTN3Q9P232 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CNTN3Q9P232 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
CNTN3Q9P232 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CNTN3Q9P232 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CNTN3Q9P232 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 PVRIG2P-201ENST00000435460 978 ntBASIC20.01■□□□□ 0.79
CNTN3Q9P232 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CNTN3Q9P232 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CNTN3Q9P232 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CNTN3Q9P232 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20■□□□□ 0.79
CNTN3Q9P232 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20■□□□□ 0.79
CNTN3Q9P232 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20■□□□□ 0.79
CNTN3Q9P232 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CNTN3Q9P232 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20■□□□□ 0.79
CNTN3Q9P232 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CNTN3Q9P232 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20■□□□□ 0.79
CNTN3Q9P232 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CNTN3Q9P232 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 AC009065.1-201ENST00000564055 1225 ntBASIC19.99■□□□□ 0.79
CNTN3Q9P232 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CNTN3Q9P232 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CNTN3Q9P232 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CNTN3Q9P232 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CNTN3Q9P232 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms