Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 KRT8P3-201ENST00000519669 1449 ntBASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KRCC1Q9NPI7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 AL023875.1-201ENST00000640777 796 ntBASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
KRCC1Q9NPI7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 KRT8P11-201ENST00000409686 1436 ntBASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 KRT8P32-201ENST00000512863 1461 ntBASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KRCC1Q9NPI7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
KRCC1Q9NPI7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.08■□□□□ 0.32
KRCC1Q9NPI7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
KRCC1Q9NPI7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.08■□□□□ 0.32
KRCC1Q9NPI7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms