Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.94■■□□□ 1.1
RNF41Q9H4P4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 AC092647.4-201ENST00000457211 535 ntBASIC21.94■■□□□ 1.1
RNF41Q9H4P4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 AC022616.7-201ENST00000525383 220 ntBASIC21.94■■□□□ 1.1
RNF41Q9H4P4 AC009065.1-201ENST00000564055 1225 ntBASIC21.94■■□□□ 1.1
RNF41Q9H4P4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF41Q9H4P4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 FAM8A6P-201ENST00000407496 1135 ntBASIC21.93■■□□□ 1.1
RNF41Q9H4P4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 MIR3917-201ENST00000580971 93 ntBASIC21.93■■□□□ 1.1
RNF41Q9H4P4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RNF41Q9H4P4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 MYLKP1-201ENST00000509077 1580 ntBASIC21.92■■□□□ 1.1
RNF41Q9H4P4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 STARP1-201ENST00000397973 869 ntBASIC21.92■■□□□ 1.1
RNF41Q9H4P4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 AC087289.5-201ENST00000586076 3175 ntBASIC21.92■■□□□ 1.1
RNF41Q9H4P4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF41Q9H4P4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 AL590326.2-201ENST00000625139 305 ntBASIC21.91■■□□□ 1.1
RNF41Q9H4P4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF41Q9H4P4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 AL499627.1-201ENST00000569373 2188 ntBASIC21.9■■□□□ 1.1
RNF41Q9H4P4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF41Q9H4P4 RASA4DP-201ENST00000460726 1199 ntBASIC21.9■■□□□ 1.1
RNF41Q9H4P4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms