Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPBQ9H078 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPBQ9H078 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.71■□□□□ 0.59
CLPBQ9H078 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLPBQ9H078 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLPBQ9H078 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.71■□□□□ 0.58
CLPBQ9H078 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.7■□□□□ 0.58
CLPBQ9H078 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CLPBQ9H078 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CLPBQ9H078 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLPBQ9H078 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 AL512604.3-201ENST00000569583 964 ntBASIC18.7■□□□□ 0.58
CLPBQ9H078 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLPBQ9H078 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.7■□□□□ 0.58
CLPBQ9H078 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.7■□□□□ 0.58
CLPBQ9H078 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.7■□□□□ 0.58
CLPBQ9H078 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLPBQ9H078 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CLPBQ9H078 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CLPBQ9H078 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLPBQ9H078 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPBQ9H078 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLPBQ9H078 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPBQ9H078 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.69■□□□□ 0.58
CLPBQ9H078 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.69■□□□□ 0.58
CLPBQ9H078 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.69■□□□□ 0.58
CLPBQ9H078 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.69■□□□□ 0.58
CLPBQ9H078 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.69■□□□□ 0.58
CLPBQ9H078 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLPBQ9H078 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPBQ9H078 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.68■□□□□ 0.58
CLPBQ9H078 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPBQ9H078 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 AL031133.1-201ENST00000406807 723 ntBASIC18.68■□□□□ 0.58
CLPBQ9H078 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPBQ9H078 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 AL441883.1-201ENST00000566170 1045 ntBASIC18.68■□□□□ 0.58
CLPBQ9H078 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
CLPBQ9H078 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 AL023973.1-201ENST00000624619 620 ntBASIC18.68■□□□□ 0.58
CLPBQ9H078 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CLPBQ9H078 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.68■□□□□ 0.58
CLPBQ9H078 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPBQ9H078 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
CLPBQ9H078 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLPBQ9H078 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms