Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM2Q9C040 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM2Q9C040 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM2Q9C040 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM2Q9C040 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
TRIM2Q9C040 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 MESTP1-201ENST00000404287 994 ntBASIC17.14■□□□□ 0.33
TRIM2Q9C040 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 DGCR10-201ENST00000609839 495 ntBASIC17.14■□□□□ 0.33
TRIM2Q9C040 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM2Q9C040 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM2Q9C040 OR6D1P-202ENST00000641007 5290 ntBASIC17.13■□□□□ 0.33
TRIM2Q9C040 AC112777.1-201ENST00000540175 1423 ntBASIC17.13■□□□□ 0.33
TRIM2Q9C040 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.13■□□□□ 0.33
TRIM2Q9C040 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM2Q9C040 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM2Q9C040 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 RCC2P3-201ENST00000418112 1537 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AC116562.2-201ENST00000507042 360 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 NUDT16P1-203ENST00000513809 620 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 BX088651.1-201ENST00000540551 451 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 REXO1L12P-201ENST00000622156 912 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AC096733.2-201ENST00000609937 1394 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AC135050.7-201ENST00000624508 2218 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM2Q9C040 AL357033.4-201ENST00000617703 1807 ntBASIC17.12■□□□□ 0.33
TRIM2Q9C040 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms