Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 AF228730.7-201ENST00000641842 219 ntBASIC19.94■□□□□ 0.78
YME1L1Q96TA2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
YME1L1Q96TA2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 FEM1AP3-201ENST00000403722 1741 ntBASIC19.93■□□□□ 0.78
YME1L1Q96TA2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AC091607.1-201ENST00000490318 1060 ntBASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 AL773604.1-201ENST00000617417 272 ntBASIC19.93■□□□□ 0.78
YME1L1Q96TA2 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TP73-AS1-207ENST00000624167 988 ntBASIC19.93■□□□□ 0.78
YME1L1Q96TA2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.93■□□□□ 0.78
YME1L1Q96TA2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
YME1L1Q96TA2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 KRT18P13-201ENST00000400056 1290 ntBASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 IL9RP2-201ENST00000423948 1312 ntBASIC19.91■□□□□ 0.78
YME1L1Q96TA2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YME1L1Q96TA2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms