Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00479Q96M42 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00479Q96M42 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00479Q96M42 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00479Q96M42 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00479Q96M42 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00479Q96M42 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 RCC2P6-201ENST00000526625 1557 ntBASIC14.22□□□□□ -0.13
LINC00479Q96M42 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 AC133552.2-202ENST00000575694 574 ntBASIC14.22□□□□□ -0.13
LINC00479Q96M42 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00479Q96M42 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00479Q96M42 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 AC012317.2-201ENST00000623305 2251 ntBASIC14.21□□□□□ -0.13
LINC00479Q96M42 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00479Q96M42 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00479Q96M42 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00479Q96M42 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00479Q96M42 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00479Q96M42 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00479Q96M42 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LINC00479Q96M42 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00479Q96M42 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00479Q96M42 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms