Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 MST1L-201ENST00000442552 2185 ntBASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 AL161938.1-201ENST00000569833 2180 ntBASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 AC126763.1-201ENST00000552015 2118 ntBASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COX4I2Q96KJ9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 AL135905.2-201ENST00000584934 1404 ntBASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 AC245052.3-201ENST00000450182 901 ntBASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 AC012306.2-201ENST00000609350 630 ntBASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COX4I2Q96KJ9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 BX119927.1-201ENST00000636596 1552 ntBASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 AL445228.2-201ENST00000605589 952 ntBASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
COX4I2Q96KJ9 AL162727.3-201ENST00000635661 2787 ntBASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COX4I2Q96KJ9 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms