Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 Z99916.2-201ENST00000604037 246 ntBASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 MYC-208ENST00000641036 567 ntBASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.41■□□□□ 0.7
CCHCR1Q8TD31 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 AL445675.2-201ENST00000620291 557 ntBASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 AL049637.2-201ENST00000641778 930 ntBASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 KRT16P1-201ENST00000399124 1418 ntBASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCHCR1Q8TD31 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.39■□□□□ 0.7
CCHCR1Q8TD31 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.39■□□□□ 0.7
CCHCR1Q8TD31 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCHCR1Q8TD31 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCHCR1Q8TD31 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCHCR1Q8TD31 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 AC093827.2-201ENST00000512654 315 ntBASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 AC131212.4-201ENST00000623606 975 ntBASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 CR392000.1-201ENST00000624770 1228 ntBASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 KRT8P41-201ENST00000533985 1514 ntBASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 RCC2P6-201ENST00000526625 1557 ntBASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCHCR1Q8TD31 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.38■□□□□ 0.69
CCHCR1Q8TD31 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms