Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 SLC25A1P2-201ENST00000430693 912 ntBASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 KRT18P58-201ENST00000527480 1120 ntBASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 AC140113.2-201ENST00000604370 208 ntBASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC17A8Q8NDX2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC17A8Q8NDX2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.89■□□□□ 0.94
SLC17A8Q8NDX2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 HLA-A-201ENST00000376802 1334 ntBASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 MRPL3P1-201ENST00000400109 1033 ntBASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 BX842568.4-201ENST00000421222 227 ntBASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 BX323043.1-201ENST00000641006 1765 ntBASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC17A8Q8NDX2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 AL732292.2-201ENST00000609649 430 ntBASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC17A8Q8NDX2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 KRT18P1-202ENST00000452408 1331 ntBASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC17A8Q8NDX2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms