Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 REXO1L12P-201ENST00000622156 912 ntBASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LSMEM1Q8N8F7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 AC097488.1-201ENST00000507834 756 ntBASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 AC008622.2-201ENST00000617006 1229 ntBASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.05■□□□□ 0.32
LSMEM1Q8N8F7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AL355355.2-201ENST00000442321 338 ntBASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 Z99916.2-201ENST00000604037 246 ntBASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AC026471.5-201ENST00000615068 467 ntBASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 AC099398.1-201ENST00000567919 2776 ntBASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LSMEM1Q8N8F7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AL162741.1-201ENST00000565563 1558 ntBASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 AC008556.1-201ENST00000610908 2040 ntBASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LSMEM1Q8N8F7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms