Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 FAM8A6P-201ENST00000407496 1135 ntBASIC19■□□□□ 0.63
PCDH20Q8N6Y1 HOMER2P1-201ENST00000455653 964 ntBASIC19■□□□□ 0.63
PCDH20Q8N6Y1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 AL441883.1-201ENST00000566170 1045 ntBASIC19■□□□□ 0.63
PCDH20Q8N6Y1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH20Q8N6Y1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 AC092647.4-201ENST00000457211 535 ntBASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 KRT18P35-201ENST00000510488 1269 ntBASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 AL445228.2-201ENST00000605589 952 ntBASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 AC068587.9-201ENST00000641814 219 ntBASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 AC008556.1-201ENST00000610908 2040 ntBASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH20Q8N6Y1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 NTF6B-201ENST00000591913 560 ntBASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH20Q8N6Y1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH20Q8N6Y1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms