Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 AC073592.3-201ENST00000625118 1834 ntBASIC19.77■□□□□ 0.76
TTC39CQ8N584 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 SEC1P-202ENST00000473944 940 ntBASIC19.77■□□□□ 0.76
TTC39CQ8N584 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC39CQ8N584 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TTC39CQ8N584 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TTC39CQ8N584 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AC010240.3-201ENST00000607688 395 ntBASIC19.76■□□□□ 0.75
TTC39CQ8N584 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AC087289.5-201ENST00000586076 3175 ntBASIC19.76■□□□□ 0.75
TTC39CQ8N584 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 AL163051.1-201ENST00000569214 1512 ntBASIC19.76■□□□□ 0.75
TTC39CQ8N584 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC39CQ8N584 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC39CQ8N584 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 MIR149-201ENST00000384879 89 ntBASIC19.75■□□□□ 0.75
TTC39CQ8N584 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 AC024243.1-201ENST00000609234 778 ntBASIC19.75■□□□□ 0.75
TTC39CQ8N584 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC39CQ8N584 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TTC39CQ8N584 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 RNF152P1-201ENST00000397754 604 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 RCN1P1-201ENST00000400413 996 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 KRT18P57-201ENST00000443599 1254 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 HOMER2P1-201ENST00000455653 964 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 YBX1P2-201ENST00000489612 999 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 MIR3917-201ENST00000580971 93 ntBASIC19.74■□□□□ 0.75
TTC39CQ8N584 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.74■□□□□ 0.75
TTC39CQ8N584 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC39CQ8N584 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms