Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 TSPY17P-201ENST00000450329 467 ntBASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AP003041.3-201ENST00000527151 707 ntBASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC116Q8IYX3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 MMP23A-201ENST00000234610 1017 ntBASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CCR12P-201ENST00000446203 998 ntBASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 KRT8P9-201ENST00000558927 1449 ntBASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC116Q8IYX3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 MIR564-202ENST00000385049 94 ntBASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 MIR4674-201ENST00000582457 87 ntBASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 AC116562.4-202ENST00000641738 218 ntBASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC116Q8IYX3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms