Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AF228730.7-201ENST00000641842 219 ntBASIC19.71■□□□□ 0.75
RNF135Q8IUD6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 AC087289.5-201ENST00000586076 3175 ntBASIC19.71■□□□□ 0.75
RNF135Q8IUD6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF135Q8IUD6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 AC012615.1-201ENST00000565797 1299 ntBASIC19.7■□□□□ 0.74
RNF135Q8IUD6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF135Q8IUD6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 MIR574-201ENST00000385209 96 ntBASIC19.69■□□□□ 0.74
RNF135Q8IUD6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 AC092183.1-201ENST00000469884 875 ntBASIC19.69■□□□□ 0.74
RNF135Q8IUD6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF135Q8IUD6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 TSPY22P-201ENST00000427496 604 ntBASIC19.68■□□□□ 0.74
RNF135Q8IUD6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF135Q8IUD6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF135Q8IUD6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms