Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 KRT16P1-201ENST00000399124 1418 ntBASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDHR3Q6ZTQ4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CDHR3Q6ZTQ4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 BX088651.1-201ENST00000540551 451 ntBASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDHR3Q6ZTQ4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 NUDT16P1-203ENST00000513809 620 ntBASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC073912.3-201ENST00000624414 853 ntBASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.69■□□□□ 0.58
CDHR3Q6ZTQ4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AL445675.2-201ENST00000620291 557 ntBASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AC068587.9-201ENST00000641814 219 ntBASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.68■□□□□ 0.58
CDHR3Q6ZTQ4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CDHR3Q6ZTQ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms