Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC009113.1-201ENST00000570267 2443 ntBASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 RCC2P3-201ENST00000418112 1537 ntBASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NHLRC1Q6VVB1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AL357033.4-201ENST00000617703 1807 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AL390955.1-201ENST00000428694 934 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AC093827.2-201ENST00000512654 315 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 MIR4674-201ENST00000582457 87 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 AL390961.4-201ENST00000623958 2535 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 GPAT2P1-201ENST00000444924 1672 ntBASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
NHLRC1Q6VVB1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NHLRC1Q6VVB1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NHLRC1Q6VVB1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 KRT8P9-201ENST00000558927 1449 ntBASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 AC092338.2-201ENST00000568827 1415 ntBASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 SLC25A1P2-201ENST00000430693 912 ntBASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 AL353719.1-201ENST00000566847 864 ntBASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.7■□□□□ 0.26
NHLRC1Q6VVB1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms