Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SH2D4BQ5SQS7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH2D4BQ5SQS7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.46■□□□□ 0.54
SH2D4BQ5SQS7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.46■□□□□ 0.54
SH2D4BQ5SQS7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 HLA-A-209ENST00000638375 975 ntBASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 AL162741.1-201ENST00000565563 1558 ntBASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SH2D4BQ5SQS7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 AC073592.3-201ENST00000625118 1834 ntBASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH2D4BQ5SQS7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.43■□□□□ 0.54
SH2D4BQ5SQS7 ABALON-201ENST00000629058 1903 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms