Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 WDR59-213ENST00000567018 566 ntTSL 38.24□□□□□ -1.097e-8■□□□□ 9.2
LSM11P83369 WDR59-220ENST00000569788 805 ntTSL 47.88□□□□□ -1.157e-8■□□□□ 9.2
LSM11P83369 PSME2-207ENST00000559056 512 ntTSL 57.22□□□□□ -1.259e-8■□□□□ 9.2
LSM11P83369 TMEM94-209ENST00000579208 3543 ntTSL 5 BASIC10.82□□□□□ -0.684e-11■□□□□ 9.2
LSM11P83369 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.973e-6■□□□□ 9.2
LSM11P83369 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.14■□□□□ 0.343e-6■□□□□ 9.2
LSM11P83369 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.173e-6■□□□□ 9.2
LSM11P83369 UNC45A-204ENST00000471780 1730 ntTSL 516.1■□□□□ 0.173e-6■□□□□ 9.2
LSM11P83369 PKP4-204ENST00000421462 3099 ntTSL 215.87■□□□□ 0.133e-6■□□□□ 9.2
LSM11P83369 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.07■□□□□ 03e-6■□□□□ 9.2
LSM11P83369 UNC45A-207ENST00000487875 2641 ntTSL 214.11□□□□□ -0.153e-6■□□□□ 9.2
LSM11P83369 PKP4-214ENST00000492496 796 ntTSL 313.88□□□□□ -0.193e-6■□□□□ 9.2
LSM11P83369 FADS3-210ENST00000531956 841 ntTSL 513.25□□□□□ -0.293e-6■□□□□ 9.2
LSM11P83369 FADS3-212ENST00000534223 800 ntTSL 511.62□□□□□ -0.553e-6■□□□□ 9.2
LSM11P83369 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.663e-6■□□□□ 9.2
LSM11P83369 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.73e-6■□□□□ 9.2
LSM11P83369 PKP4-206ENST00000452162 2359 ntTSL 1 (best)9.96□□□□□ -0.813e-6■□□□□ 9.2
LSM11P83369 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC9.72□□□□□ -0.853e-6■□□□□ 9.2
LSM11P83369 ANKRD28-211ENST00000492895 539 ntTSL 47.6□□□□□ -1.193e-6■□□□□ 9.2
LSM11P83369 ANKRD28-204ENST00000451422 2485 ntTSL 27.15□□□□□ -1.263e-6■□□□□ 9.2
LSM11P83369 STX6-202ENST00000469135 4842 ntTSL 1 (best)6.21□□□□□ -1.423e-6■□□□□ 9.2
LSM11P83369 ANKRD28-212ENST00000497037 3509 ntTSL 24.56□□□□□ -1.683e-6■□□□□ 9.2
LSM11P83369 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.69□□□□□ -1.823e-6■□□□□ 9.2
LSM11P83369 ANKRD28-213ENST00000498524 4289 ntTSL 23.48□□□□□ -1.853e-6■□□□□ 9.2
LSM11P83369 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.34e-12■□□□□ 9.2
LSM11P83369 ATXN2L-219ENST00000566007 471 ntTSL 37.92□□□□□ -1.144e-12■□□□□ 9.2
LSM11P83369 AP1G2-218ENST00000555510 584 ntTSL 512.14□□□□□ -0.476e-13■□□□□ 9.1
LSM11P83369 AP1G2-228ENST00000556966 1098 ntTSL 310.16□□□□□ -0.786e-13■□□□□ 9.1
LSM11P83369 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.146e-6■□□□□ 9.1
LSM11P83369 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.056e-6■□□□□ 9.1
LSM11P83369 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.266e-6■□□□□ 9.1
LSM11P83369 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.36e-6■□□□□ 9.1
LSM11P83369 BCR-207ENST00000463770 168 ntTSL 1 (best)13.11□□□□□ -0.316e-6■□□□□ 9.1
LSM11P83369 TNPO2-213ENST00000589149 564 ntTSL 513.11□□□□□ -0.316e-6■□□□□ 9.1
LSM11P83369 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.366e-6■□□□□ 9.1
LSM11P83369 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.466e-6■□□□□ 9.1
LSM11P83369 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.486e-6■□□□□ 9.1
LSM11P83369 BCR-212ENST00000479188 658 ntTSL 411.92□□□□□ -0.56e-6■□□□□ 9.1
LSM11P83369 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC11.68□□□□□ -0.546e-6■□□□□ 9.1
LSM11P83369 AC233280.19-201ENST00000633223 136 ntBASIC11.01□□□□□ -0.656e-6■□□□□ 9.1
LSM11P83369 ZC3HC1-209ENST00000481503 1741 ntTSL 5 BASIC10.89□□□□□ -0.676e-6■□□□□ 9.1
LSM11P83369 NADSYN1-219ENST00000531236 3429 ntTSL 210.86□□□□□ -0.676e-6■□□□□ 9.1
LSM11P83369 NADSYN1-207ENST00000526039 769 ntTSL 510.79□□□□□ -0.686e-6■□□□□ 9.1
LSM11P83369 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.76e-6■□□□□ 9.1
LSM11P83369 NADSYN1-215ENST00000529840 820 ntTSL 510.66□□□□□ -0.76e-6■□□□□ 9.1
LSM11P83369 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC10.53□□□□□ -0.726e-6■□□□□ 9.1
LSM11P83369 NADSYN1-210ENST00000527852 582 ntTSL 510.36□□□□□ -0.756e-6■□□□□ 9.1
LSM11P83369 ZC3HC1-204ENST00000467642 1934 ntTSL 28.77□□□□□ -1.016e-6■□□□□ 9.1
LSM11P83369 BCR-214ENST00000487679 231 ntTSL 1 (best)7.38□□□□□ -1.236e-6■□□□□ 9.1
LSM11P83369 NADSYN1-202ENST00000524450 376 ntTSL 25.76□□□□□ -1.496e-6■□□□□ 9.1
LSM11P83369 RBM6-208ENST00000438912 473 ntTSL 59.25□□□□□ -0.933e-8■□□□□ 9.1
LSM11P83369 PLXNB1-219ENST00000497627 317 ntTSL 37.63□□□□□ -1.193e-6■□□□□ 9.1
LSM11P83369 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-8■□□□□ 9.1
LSM11P83369 PGS1-211ENST00000589425 1944 ntTSL 1 (best)18.08■□□□□ 0.491e-8■□□□□ 9.1
LSM11P83369 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.8■□□□□ 0.441e-14■□□□□ 9.1
LSM11P83369 PGS1-212ENST00000589426 2033 ntTSL 1 (best)17.49■□□□□ 0.391e-8■□□□□ 9.1
LSM11P83369 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.57■□□□□ 0.247e-7■□□□□ 9.1
LSM11P83369 RGS12-216ENST00000509772 540 ntTSL 316.11■□□□□ 0.177e-7■□□□□ 9.1
LSM11P83369 SORBS3-206ENST00000519127 209 ntTSL 216.1■□□□□ 0.177e-7■□□□□ 9.1
LSM11P83369 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.91■□□□□ 0.141e-14■□□□□ 9.1
LSM11P83369 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.131e-14■□□□□ 9.1
LSM11P83369 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.82■□□□□ 0.121e-8■□□□□ 9.1
LSM11P83369 PGS1-210ENST00000588281 1776 ntTSL 1 (best)15.39■□□□□ 0.051e-8■□□□□ 9.1
LSM11P83369 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 07e-7■□□□□ 9.1
LSM11P83369 PPP6R1-204ENST00000587457 2389 ntTSL 214.88□□□□□ -0.037e-7■□□□□ 9.1
LSM11P83369 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.067e-7■□□□□ 9.1
LSM11P83369 AC010327.5-201ENST00000586923 3061 ntBASIC13.84□□□□□ -0.197e-7■□□□□ 9.1
LSM11P83369 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.67□□□□□ -0.221e-6■□□□□ 9.1
LSM11P83369 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.257e-7■□□□□ 9.1
LSM11P83369 PGS1-207ENST00000586880 431 ntTSL 313.12□□□□□ -0.311e-8■□□□□ 9.1
LSM11P83369 SERPINF1-208ENST00000572517 672 ntTSL 212.94□□□□□ -0.344e-19■□□□□ 9.1
LSM11P83369 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.394e-19■□□□□ 9.1
LSM11P83369 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.41e-6■□□□□ 9.1
LSM11P83369 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.42□□□□□ -0.427e-7■□□□□ 9.1
LSM11P83369 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.457e-7■□□□□ 9.1
LSM11P83369 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.517e-7■□□□□ 9.1
LSM11P83369 RGS12-207ENST00000504194 3522 ntTSL 1 (best)11.18□□□□□ -0.627e-7■□□□□ 9.1
LSM11P83369 ALAD-208ENST00000482847 3247 ntTSL 29.95□□□□□ -0.827e-7■□□□□ 9.1
LSM11P83369 RALGAPA1-210ENST00000554704 2698 ntTSL 26.64□□□□□ -1.351e-8■□□□□ 9.1
LSM11P83369 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.62□□□□□ -1.511e-8■□□□□ 9.1
LSM11P83369 RALGAPA1-208ENST00000554573 2358 ntTSL 55.29□□□□□ -1.562e-6■□□□□ 9.1
LSM11P83369 MSL1-201ENST00000339569 3424 ntTSL 24.82□□□□□ -1.647e-7■□□□□ 9.1
LSM11P83369 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.5□□□□□ -1.691e-8■□□□□ 9.1
LSM11P83369 RALGAPA1-209ENST00000554652 4487 ntTSL 24.45□□□□□ -1.71e-8■□□□□ 9.1
LSM11P83369 RALGAPA1-206ENST00000554259 3354 ntTSL 53.54□□□□□ -1.842e-6■□□□□ 9.1
LSM11P83369 GSE1-205ENST00000412692 6625 ntTSL 513.65□□□□□ -0.223e-10■□□□□ 9.1
LSM11P83369 GSE1-207ENST00000469381 5885 ntTSL 210.3□□□□□ -0.763e-10■□□□□ 9.1
LSM11P83369 SF3B1-212ENST00000496458 475 ntTSL 214.31□□□□□ -0.121e-7■□□□□ 9.1
LSM11P83369 SF3B1-205ENST00000424674 723 ntTSL 47.62□□□□□ -1.191e-7■□□□□ 9.1
LSM11P83369 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.1□□□□□ -0.153e-8■□□□□ 9.1
LSM11P83369 RARRES2-204ENST00000478771 1907 ntTSL 220.1■□□□□ 0.811e-7■□□□□ 9.1
LSM11P83369 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.621e-7■□□□□ 9.1
LSM11P83369 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.581e-7■□□□□ 9.1
LSM11P83369 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.191e-7■□□□□ 9.1
LSM11P83369 RARRES2-203ENST00000467793 583 ntTSL 313.91□□□□□ -0.181e-7■□□□□ 9.1
LSM11P83369 RBM39-236ENST00000490484 871 ntTSL 58.93□□□□□ -0.986e-13■□□□□ 9.1
LSM11P83369 RBM39-239ENST00000494274 704 ntTSL 36.3□□□□□ -1.46e-13■□□□□ 9.1
LSM11P83369 CRELD1-209ENST00000482691 690 ntTSL 312.35□□□□□ -0.431e-6■□□□□ 9
LSM11P83369 CRELD1-210ENST00000489674 437 ntTSL 511.25□□□□□ -0.611e-6■□□□□ 9
LSM11P83369 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.47□□□□□ -0.253e-7■□□□□ 9
Retrieved 100 of 11,495 protein–RNA pairs in 385 ms