RNA–Protein interactions for RNA: ENST00000339569.9

MSL1-201, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 3,424 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-201ENST00000339569 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.58
MSL1-201ENST00000339569 AEBP2Q6ZN18 517 aaPredicted RBP11.18□□□□□ -0.62
MSL1-201ENST00000339569 CHIC1Q5VXU3 224 aa10.65□□□□□ -0.7
MSL1-201ENST00000339569 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
MSL1-201ENST00000339569 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
MSL1-201ENST00000339569 DCAF1Q9Y4B6 1507 aa9.86□□□□□ -0.83
MSL1-201ENST00000339569 MYO15BQ96JP2 1530 aa9.84□□□□□ -0.83
MSL1-201ENST00000339569 PHF23Q9BUL5 403 aaPredicted RBP9.68□□□□□ -0.86
MSL1-201ENST00000339569 EHMT2Q96KQ7 1210 aa9.66□□□□□ -0.86
MSL1-201ENST00000339569 ZCCHC6Q5VYS8 1495 aaKnown RBP9.66□□□□□ -0.86
MSL1-201ENST00000339569 PLPPR3Q6T4P5 718 aa9.5□□□□□ -0.89
MSL1-201ENST00000339569 NACADO15069 1562 aa9.47□□□□□ -0.89
MSL1-201ENST00000339569 SHROOM4Q9ULL8 1493 aa9.36□□□□□ -0.91
MSL1-201ENST00000339569 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
MSL1-201ENST00000339569 RTN4Q9NQC3 1192 aaKnown RBP9.25□□□□□ -0.93
MSL1-201ENST00000339569 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
MSL1-201ENST00000339569 ABCC9O60706 1549 aa9.07□□□□□ -0.96
MSL1-201ENST00000339569 SENP3Q9H4L4 574 aaPredicted RBP9.03□□□□□ -0.96
MSL1-201ENST00000339569 KCNA4P22459 653 aa9.01□□□□□ -0.97
MSL1-201ENST00000339569 PEG3Q9GZU2 1588 aa9□□□□□ -0.97
MSL1-201ENST00000339569 CSRNP3Q8WYN3 585 aa8.99□□□□□ -0.97
MSL1-201ENST00000339569 BICRAQ9NZM4 1560 aa8.96□□□□□ -0.98
MSL1-201ENST00000339569 DNAJC5Q9H3Z4 198 aa8.92□□□□□ -0.98
MSL1-201ENST00000339569 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
MSL1-201ENST00000339569 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
MSL1-201ENST00000339569 SCRIBQ14160 1630 aa8.85□□□□□ -0.99
MSL1-201ENST00000339569 SMARCA2P51531 1590 aa8.84□□□□□ -0.99
MSL1-201ENST00000339569 SMARCA4P51532 1647 aa8.8□□□□□ -1
MSL1-201ENST00000339569 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
MSL1-201ENST00000339569 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
MSL1-201ENST00000339569 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
MSL1-201ENST00000339569 DNAJC5BQ9UF47 199 aa8.72□□□□□ -1.01
MSL1-201ENST00000339569 PRDM2Q13029 1718 aa8.71□□□□□ -1.02
MSL1-201ENST00000339569 TOP2AP11388 1531 aaKnown RBP8.71□□□□□ -1.02
MSL1-201ENST00000339569 EIF4G1Q04637 1599 aaKnown RBP8.7□□□□□ -1.02
MSL1-201ENST00000339569 ADRA2BP18089 450 aa8.7□□□□□ -1.02
MSL1-201ENST00000339569 PPP6R1Q9UPN7 881 aa8.7□□□□□ -1.02
MSL1-201ENST00000339569 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
MSL1-201ENST00000339569 FOXD1Q16676 465 aa8.69□□□□□ -1.02
MSL1-201ENST00000339569 RSF1Q96T23 1441 aaPredicted RBP8.67□□□□□ -1.02
MSL1-201ENST00000339569 NCAPD3P42695 1498 aa8.62□□□□□ -1.03
MSL1-201ENST00000339569 MROH2BQ7Z745 1585 aa8.62□□□□□ -1.03
MSL1-201ENST00000339569 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
MSL1-201ENST00000339569 CUX2O14529 1486 aa8.57□□□□□ -1.04
MSL1-201ENST00000339569 WIZO95785 1651 aa8.55□□□□□ -1.04
MSL1-201ENST00000339569 ATAD2BQ9ULI0 1458 aa8.54□□□□□ -1.04
MSL1-201ENST00000339569 CECR2Q9BXF3 1484 aa8.53□□□□□ -1.04
MSL1-201ENST00000339569 DCAF8L2P0C7V8 631 aa8.52□□□□□ -1.04
MSL1-201ENST00000339569 BIVM-ERCC5R4GMW8 1640 aa8.44□□□□□ -1.06
MSL1-201ENST00000339569 WDR97A6NE52 1622 aa8.44□□□□□ -1.06
MSL1-201ENST00000339569 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
MSL1-201ENST00000339569 TULP1O00294 542 aaPredicted RBP8.41□□□□□ -1.06
MSL1-201ENST00000339569 BAZ1BQ9UIG0 1483 aaKnown RBP8.4□□□□□ -1.06
MSL1-201ENST00000339569 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.06
MSL1-201ENST00000339569 ZBTB22O15209 634 aa8.4□□□□□ -1.07
MSL1-201ENST00000339569 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.07
MSL1-201ENST00000339569 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.07
MSL1-201ENST00000339569 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
MSL1-201ENST00000339569 CFTRP13569 1480 aa8.36□□□□□ -1.07
MSL1-201ENST00000339569 TOP2BQ02880 1626 aa8.33□□□□□ -1.08
MSL1-201ENST00000339569 ABCC8Q09428 1581 aa8.31□□□□□ -1.08
MSL1-201ENST00000339569 EEA1Q15075 1411 aa8.31□□□□□ -1.08
MSL1-201ENST00000339569 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
MSL1-201ENST00000339569 PIAS4Q8N2W9 510 aaPredicted RBP8.28□□□□□ -1.08
MSL1-201ENST00000339569 ARXQ96QS3 562 aa8.26□□□□□ -1.09
MSL1-201ENST00000339569 KIF21BO75037 1637 aa8.22□□□□□ -1.09
MSL1-201ENST00000339569 DNMBPQ6XZF7 1577 aa8.22□□□□□ -1.09
MSL1-201ENST00000339569 KLHL34Q8N239 644 aa8.22□□□□□ -1.09
MSL1-201ENST00000339569 APLP2Q06481 763 aa8.2□□□□□ -1.1
MSL1-201ENST00000339569 CADPSQ9ULU8 1353 aa8.19□□□□□ -1.1
MSL1-201ENST00000339569 ERICH3Q5RHP9 1530 aa8.18□□□□□ -1.1
MSL1-201ENST00000339569 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
MSL1-201ENST00000339569 WDR62O43379 1518 aa8.15□□□□□ -1.1
MSL1-201ENST00000339569 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
MSL1-201ENST00000339569 PABPN1Q86U42 306 aaKnown RBP eCLIP8.15□□□□□ -1.1
MSL1-201ENST00000339569 CUL7Q14999 1698 aa8.14□□□□□ -1.11
MSL1-201ENST00000339569 BCANQ96GW7 911 aa8.13□□□□□ -1.11
MSL1-201ENST00000339569 ABCA5Q8WWZ7 1642 aa8.12□□□□□ -1.11
MSL1-201ENST00000339569 CUX1P39880 1505 aa8.12□□□□□ -1.11
MSL1-201ENST00000339569 THOC2Q8NI27 1593 aaKnown RBP8.11□□□□□ -1.11
MSL1-201ENST00000339569 WRNQ14191 1432 aaPredicted RBP eCLIP8.11□□□□□ -1.11
MSL1-201ENST00000339569 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
MSL1-201ENST00000339569 TARBP1Q13395 1621 aaKnown RBP8.1□□□□□ -1.11
MSL1-201ENST00000339569 KIF21AQ7Z4S6 1674 aa8.1□□□□□ -1.11
MSL1-201ENST00000339569 PDS5BQ9NTI5 1447 aa8.09□□□□□ -1.11
MSL1-201ENST00000339569 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
MSL1-201ENST00000339569 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
MSL1-201ENST00000339569 FANCD2Q9BXW9 1451 aa8.06□□□□□ -1.12
MSL1-201ENST00000339569 CEP164Q9UPV0 1460 aa8.05□□□□□ -1.12
MSL1-201ENST00000339569 TOPBP1Q92547 1522 aa8.04□□□□□ -1.12
MSL1-201ENST00000339569 MRC2Q9UBG0 1479 aa8.04□□□□□ -1.12
MSL1-201ENST00000339569 PRXQ9BXM0 1461 aa8.03□□□□□ -1.12
MSL1-201ENST00000339569 GTF3C3Q9Y5Q9 886 aa8.03□□□□□ -1.12
MSL1-201ENST00000339569 HOMEZQ8IX15 550 aa8.03□□□□□ -1.12
MSL1-201ENST00000339569 PBRM1Q86U86 1689 aa8.02□□□□□ -1.12
MSL1-201ENST00000339569 NPM3O75607 178 aaKnown RBP8.01□□□□□ -1.13
MSL1-201ENST00000339569 CTTNBP2Q8WZ74 1663 aa8.01□□□□□ -1.13
MSL1-201ENST00000339569 SUPT5HO00267 1087 aaKnown RBP8□□□□□ -1.13
MSL1-201ENST00000339569 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
MSL1-201ENST00000339569 MAP3K1Q13233 1512 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms