RNA–Protein interactions for RNA: ENST00000492895.1

ANKRD28-211, Transcript of ankyrin repeat domain 28, humanhuman

TSL 4

Gene ANKRD28, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-211ENST00000492895 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
ANKRD28-211ENST00000492895 CHIC1Q5VXU3 224 aa17.01■□□□□ 0.31
ANKRD28-211ENST00000492895 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
ANKRD28-211ENST00000492895 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
ANKRD28-211ENST00000492895 FOXD1Q16676 465 aa13.85□□□□□ -0.19
ANKRD28-211ENST00000492895 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
ANKRD28-211ENST00000492895 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
ANKRD28-211ENST00000492895 ADRA2BP18089 450 aa13.22□□□□□ -0.29
ANKRD28-211ENST00000492895 PIAS4Q8N2W9 510 aaPredicted RBP13.03□□□□□ -0.32
ANKRD28-211ENST00000492895 MSH5O43196 834 aa12.82□□□□□ -0.36
ANKRD28-211ENST00000492895 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
ANKRD28-211ENST00000492895 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
ANKRD28-211ENST00000492895 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
ANKRD28-211ENST00000492895 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
ANKRD28-211ENST00000492895 DMRT2Q9Y5R5 561 aa11.88□□□□□ -0.51
ANKRD28-211ENST00000492895 CNKSR2Q8WXI2 1034 aa11.8□□□□□ -0.52
ANKRD28-211ENST00000492895 NCBP3Q53F19 620 aaKnown RBP11.77□□□□□ -0.53
ANKRD28-211ENST00000492895 KCNA4P22459 653 aa11.68□□□□□ -0.54
ANKRD28-211ENST00000492895 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
ANKRD28-211ENST00000492895 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
ANKRD28-211ENST00000492895 HOXD11P31277 338 aaPredicted RBP11.58□□□□□ -0.56
ANKRD28-211ENST00000492895 DCAF8L1A6NGE4 600 aa11.39□□□□□ -0.59
ANKRD28-211ENST00000492895 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
ANKRD28-211ENST00000492895 SLC4A1APQ9BWU0 796 aaKnown RBP11.11□□□□□ -0.63
ANKRD28-211ENST00000492895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
ANKRD28-211ENST00000492895 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
ANKRD28-211ENST00000492895 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
ANKRD28-211ENST00000492895 U3KPZ7 1027 aaPredicted RBP10.85□□□□□ -0.67
ANKRD28-211ENST00000492895 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
ANKRD28-211ENST00000492895 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
ANKRD28-211ENST00000492895 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
ANKRD28-211ENST00000492895 ZBTB22O15209 634 aa10.74□□□□□ -0.69
ANKRD28-211ENST00000492895 MYCNP04198 464 aaPredicted RBP10.7□□□□□ -0.7
ANKRD28-211ENST00000492895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.68□□□□□ -0.7
ANKRD28-211ENST00000492895 HNRNPUL2Q1KMD3 747 aaKnown RBP10.68□□□□□ -0.7
ANKRD28-211ENST00000492895 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
ANKRD28-211ENST00000492895 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
ANKRD28-211ENST00000492895 APLP2Q06481 763 aa10.59□□□□□ -0.71
ANKRD28-211ENST00000492895 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
ANKRD28-211ENST00000492895 SPINK5Q9NQ38 1064 aaPredicted RBP10.59□□□□□ -0.71
ANKRD28-211ENST00000492895 CAPN15O75808 1086 aa10.55□□□□□ -0.72
ANKRD28-211ENST00000492895 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
ANKRD28-211ENST00000492895 ZNF219Q9P2Y4 722 aaPredicted RBP10.46□□□□□ -0.73
ANKRD28-211ENST00000492895 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
ANKRD28-211ENST00000492895 ATF5Q9Y2D1 282 aaPredicted RBP10.43□□□□□ -0.74
ANKRD28-211ENST00000492895 DSG3P32926 999 aa10.41□□□□□ -0.74
ANKRD28-211ENST00000492895 ABCB7O75027 752 aa10.34□□□□□ -0.75
ANKRD28-211ENST00000492895 POLA2Q14181 598 aa10.29□□□□□ -0.76
ANKRD28-211ENST00000492895 ZBTB12Q9Y330 459 aaPredicted RBP10.09□□□□□ -0.79
ANKRD28-211ENST00000492895 FBLN2P98095 1184 aa10.01□□□□□ -0.81
ANKRD28-211ENST00000492895 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
ANKRD28-211ENST00000492895 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
ANKRD28-211ENST00000492895 RBM42Q9BTD8 480 aaKnown RBP9.92□□□□□ -0.82
ANKRD28-211ENST00000492895 SPDYE2BA6NHP3 402 aa9.81□□□□□ -0.84
ANKRD28-211ENST00000492895 SPDYE6P0CI01 402 aa9.81□□□□□ -0.84
ANKRD28-211ENST00000492895 SPDYE2Q495Y8 402 aa9.81□□□□□ -0.84
ANKRD28-211ENST00000492895 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
ANKRD28-211ENST00000492895 ZNF692Q9BU19 519 aaPredicted RBP9.76□□□□□ -0.85
ANKRD28-211ENST00000492895 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
ANKRD28-211ENST00000492895 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
ANKRD28-211ENST00000492895 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
ANKRD28-211ENST00000492895 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
ANKRD28-211ENST00000492895 FKBP8Q14318 412 aa9.58□□□□□ -0.88
ANKRD28-211ENST00000492895 PITPNM1O00562 1244 aa9.56□□□□□ -0.88
ANKRD28-211ENST00000492895 CHRDL2Q6WN34 429 aa9.55□□□□□ -0.88
ANKRD28-211ENST00000492895 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
ANKRD28-211ENST00000492895 CLEC11AQ9Y240 323 aa9.52□□□□□ -0.89
ANKRD28-211ENST00000492895 PROM2Q8N271 834 aa9.5□□□□□ -0.89
ANKRD28-211ENST00000492895 STAG3Q9UJ98 1225 aa9.44□□□□□ -0.9
ANKRD28-211ENST00000492895 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
ANKRD28-211ENST00000492895 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.9
ANKRD28-211ENST00000492895 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
ANKRD28-211ENST00000492895 POTEHQ6S545 545 aa9.4□□□□□ -0.9
ANKRD28-211ENST00000492895 PRKAR2AP13861 404 aaKnown RBP9.33□□□□□ -0.92
ANKRD28-211ENST00000492895 CHADLQ6NUI6 762 aa9.3□□□□□ -0.92
ANKRD28-211ENST00000492895 FBXO3Q9UK99 471 aa9.28□□□□□ -0.92
ANKRD28-211ENST00000492895 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
ANKRD28-211ENST00000492895 MIER1Q8N108 512 aa9.22□□□□□ -0.93
ANKRD28-211ENST00000492895 FARP1Q9Y4F1 1045 aaPredicted RBP9.2□□□□□ -0.94
ANKRD28-211ENST00000492895 PLCD3Q8N3E9 789 aa9.18□□□□□ -0.94
ANKRD28-211ENST00000492895 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
ANKRD28-211ENST00000492895 HAX1O00165 279 aa9.15□□□□□ -0.94
ANKRD28-211ENST00000492895 MNX1P50219 401 aaPredicted RBP9.14□□□□□ -0.95
ANKRD28-211ENST00000492895 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
ANKRD28-211ENST00000492895 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
ANKRD28-211ENST00000492895 C19orf67A6NJJ6 358 aa9.1□□□□□ -0.95
ANKRD28-211ENST00000492895 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
ANKRD28-211ENST00000492895 EVX2Q03828 476 aa9.06□□□□□ -0.96
ANKRD28-211ENST00000492895 CD44P16070 742 aaKnown RBP9.05□□□□□ -0.96
ANKRD28-211ENST00000492895 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
ANKRD28-211ENST00000492895 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
ANKRD28-211ENST00000492895 PAK3O75914 559 aaPredicted RBP8.98□□□□□ -0.97
ANKRD28-211ENST00000492895 NUBP1P53384 320 aa8.98□□□□□ -0.97
ANKRD28-211ENST00000492895 SP7Q8TDD2 431 aaPredicted RBP8.98□□□□□ -0.97
ANKRD28-211ENST00000492895 ZRANB1Q9UGI0 708 aa8.98□□□□□ -0.97
ANKRD28-211ENST00000492895 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
ANKRD28-211ENST00000492895 TSPYL2Q9H2G4 693 aaPredicted RBP8.96□□□□□ -0.98
ANKRD28-211ENST00000492895 SPOCK2Q92563 424 aa8.93□□□□□ -0.98
ANKRD28-211ENST00000492895 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
ANKRD28-211ENST00000492895 FAM212AQ96EL1 285 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms