Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ATP4AP20648 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.65■□□□□ 0.9
ATP4AP20648 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
ATP4AP20648 AL162741.1-201ENST00000565563 1558 ntBASIC20.65■□□□□ 0.9
ATP4AP20648 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.65■□□□□ 0.9
ATP4AP20648 KRT18P41-201ENST00000518924 1277 ntBASIC20.65■□□□□ 0.9
ATP4AP20648 AC093458.2-201ENST00000623150 629 ntBASIC20.65■□□□□ 0.9
ATP4AP20648 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP4AP20648 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.65■□□□□ 0.9
ATP4AP20648 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP4AP20648 AC087289.5-201ENST00000586076 3175 ntBASIC20.65■□□□□ 0.9
ATP4AP20648 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATP4AP20648 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.64■□□□□ 0.9
ATP4AP20648 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP4AP20648 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
ATP4AP20648 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP4AP20648 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP4AP20648 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.64■□□□□ 0.89
ATP4AP20648 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP4AP20648 MIR3180-4-201ENST00000582223 153 ntBASIC20.64■□□□□ 0.89
ATP4AP20648 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ATP4AP20648 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
ATP4AP20648 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
ATP4AP20648 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATP4AP20648 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATP4AP20648 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP4AP20648 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP4AP20648 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ATP4AP20648 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
ATP4AP20648 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 PVRIG2P-201ENST00000435460 978 ntBASIC20.63■□□□□ 0.89
ATP4AP20648 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.63■□□□□ 0.89
ATP4AP20648 RNF126P1-202ENST00000569893 925 ntBASIC20.63■□□□□ 0.89
ATP4AP20648 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.63■□□□□ 0.89
ATP4AP20648 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ATP4AP20648 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP4AP20648 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATP4AP20648 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP4AP20648 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP4AP20648 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATP4AP20648 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP4AP20648 AC011498.5-201ENST00000592027 486 ntBASIC20.62■□□□□ 0.89
ATP4AP20648 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 AC069148.1-201ENST00000608741 768 ntBASIC20.62■□□□□ 0.89
ATP4AP20648 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP4AP20648 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATP4AP20648 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP4AP20648 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATP4AP20648 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP4AP20648 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATP4AP20648 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP4AP20648 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP4AP20648 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ATP4AP20648 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP4AP20648 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP4AP20648 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.61■□□□□ 0.89
ATP4AP20648 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP4AP20648 NPAP1P7-201ENST00000613027 823 ntBASIC20.61■□□□□ 0.89
ATP4AP20648 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ATP4AP20648 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP4AP20648 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP4AP20648 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms