Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.02■□□□□ -0
APOC3P02656 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOC3P02656 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
APOC3P02656 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APOC3P02656 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.02■□□□□ -0
APOC3P02656 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.02■□□□□ -0
APOC3P02656 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APOC3P02656 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
APOC3P02656 AC116050.2-201ENST00000612102 1779 ntBASIC15.02□□□□□ -0.01
APOC3P02656 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.02□□□□□ -0.01
APOC3P02656 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.02□□□□□ -0.01
APOC3P02656 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
APOC3P02656 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APOC3P02656 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.02□□□□□ -0.01
APOC3P02656 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.02□□□□□ -0.01
APOC3P02656 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.02□□□□□ -0.01
APOC3P02656 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 AC241377.3-202ENST00000626088 1088 ntBASIC15.01□□□□□ -0.01
APOC3P02656 AC241585.3-202ENST00000628937 1088 ntBASIC15.01□□□□□ -0.01
APOC3P02656 AC245100.8-202ENST00000629247 1058 ntBASIC15.01□□□□□ -0.01
APOC3P02656 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 PCDHA14-201ENST00000506751 2298 ntBASIC15.01□□□□□ -0.01
APOC3P02656 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.01□□□□□ -0.01
APOC3P02656 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
APOC3P02656 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APOC3P02656 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.01□□□□□ -0.01
APOC3P02656 LINC00602-201ENST00000629776 2065 ntBASIC15.01□□□□□ -0.01
APOC3P02656 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15□□□□□ -0.01
APOC3P02656 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOC3P02656 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
APOC3P02656 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15□□□□□ -0.01
APOC3P02656 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOC3P02656 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15□□□□□ -0.01
APOC3P02656 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15□□□□□ -0.01
APOC3P02656 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15□□□□□ -0.01
APOC3P02656 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
APOC3P02656 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOC3P02656 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15□□□□□ -0.01
APOC3P02656 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15□□□□□ -0.01
APOC3P02656 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
APOC3P02656 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
APOC3P02656 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.99□□□□□ -0.01
APOC3P02656 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
APOC3P02656 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms