Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM3O75382 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM3O75382 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM3O75382 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TRIM3O75382 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM3O75382 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TRIM3O75382 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM3O75382 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.35■□□□□ 0.37
TRIM3O75382 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM3O75382 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM3O75382 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 TERF1P1-201ENST00000311003 1181 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM3O75382 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TRIM3O75382 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 AL137013.1-201ENST00000432946 1228 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM3O75382 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM3O75382 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM3O75382 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.34■□□□□ 0.37
TRIM3O75382 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM3O75382 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRIM3O75382 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.34■□□□□ 0.37
TRIM3O75382 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.34■□□□□ 0.37
TRIM3O75382 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRIM3O75382 AC073508.3-201ENST00000619697 1419 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 AC092865.7-201ENST00000641832 219 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 AC020763.4-201ENST00000623414 4170 ntBASIC17.34■□□□□ 0.37
TRIM3O75382 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.33■□□□□ 0.37
TRIM3O75382 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.33■□□□□ 0.37
TRIM3O75382 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM3O75382 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRIM3O75382 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TRIM3O75382 TEX21P-204ENST00000641479 1693 ntBASIC17.33■□□□□ 0.37
TRIM3O75382 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TRIM3O75382 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRIM3O75382 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRIM3O75382 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRIM3O75382 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 HMGA1P5-201ENST00000412453 271 ntBASIC17.33■□□□□ 0.36
TRIM3O75382 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.33■□□□□ 0.36
TRIM3O75382 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.33■□□□□ 0.36
TRIM3O75382 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.36
TRIM3O75382 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.33■□□□□ 0.36
TRIM3O75382 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRIM3O75382 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms