Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE3O75131 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 AC036111.1-201ENST00000533973 1582 ntBASIC17.86■□□□□ 0.45
CPNE3O75131 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE3O75131 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPNE3O75131 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
CPNE3O75131 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPNE3O75131 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.86■□□□□ 0.45
CPNE3O75131 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPNE3O75131 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE3O75131 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CPNE3O75131 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.85■□□□□ 0.45
CPNE3O75131 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CPNE3O75131 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 AC034232.1-201ENST00000506026 1064 ntBASIC17.85■□□□□ 0.45
CPNE3O75131 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE3O75131 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.85■□□□□ 0.45
CPNE3O75131 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CPNE3O75131 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CPNE3O75131 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CPNE3O75131 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.85■□□□□ 0.45
CPNE3O75131 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPNE3O75131 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE3O75131 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.84■□□□□ 0.45
CPNE3O75131 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.84■□□□□ 0.45
CPNE3O75131 VENTXP5-201ENST00000523979 775 ntBASIC17.84■□□□□ 0.45
CPNE3O75131 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CPNE3O75131 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
CPNE3O75131 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.84■□□□□ 0.45
CPNE3O75131 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPNE3O75131 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 FZD10-202ENST00000539839 3282 ntBASIC17.83■□□□□ 0.45
CPNE3O75131 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.83■□□□□ 0.45
CPNE3O75131 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.83■□□□□ 0.45
CPNE3O75131 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPNE3O75131 AC005332.1-201ENST00000577698 1310 ntBASIC17.83■□□□□ 0.44
CPNE3O75131 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.83■□□□□ 0.44
CPNE3O75131 SPDYE15P-201ENST00000424157 909 ntBASIC17.83■□□□□ 0.44
CPNE3O75131 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE3O75131 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.83■□□□□ 0.44
CPNE3O75131 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 ZNF444P1-201ENST00000559497 298 ntBASIC17.83■□□□□ 0.44
CPNE3O75131 AL136038.3-201ENST00000561909 1096 ntBASIC17.83■□□□□ 0.44
CPNE3O75131 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.83■□□□□ 0.44
CPNE3O75131 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.83■□□□□ 0.44
CPNE3O75131 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CPNE3O75131 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.83■□□□□ 0.44
CPNE3O75131 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms