Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HDAC3O15379 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.15■□□□□ 0.5
HDAC3O15379 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HDAC3O15379 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HDAC3O15379 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HDAC3O15379 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HDAC3O15379 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HDAC3O15379 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 AL138781.1-201ENST00000566567 1274 ntBASIC18.14■□□□□ 0.49
HDAC3O15379 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.14■□□□□ 0.49
HDAC3O15379 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.14■□□□□ 0.49
HDAC3O15379 AC008556.1-201ENST00000610908 2040 ntBASIC18.14■□□□□ 0.49
HDAC3O15379 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
HDAC3O15379 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
HDAC3O15379 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HDAC3O15379 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HDAC3O15379 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.13■□□□□ 0.49
HDAC3O15379 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.13■□□□□ 0.49
HDAC3O15379 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.13■□□□□ 0.49
HDAC3O15379 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HDAC3O15379 PRSS44-201ENST00000515154 1146 ntBASIC18.13■□□□□ 0.49
HDAC3O15379 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
HDAC3O15379 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.13■□□□□ 0.49
HDAC3O15379 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.13■□□□□ 0.49
HDAC3O15379 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC3O15379 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
HDAC3O15379 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.13■□□□□ 0.49
HDAC3O15379 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.13■□□□□ 0.49
HDAC3O15379 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HDAC3O15379 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HDAC3O15379 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC3O15379 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC3O15379 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
HDAC3O15379 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
HDAC3O15379 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.12■□□□□ 0.49
HDAC3O15379 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.12■□□□□ 0.49
HDAC3O15379 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.12■□□□□ 0.49
HDAC3O15379 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
HDAC3O15379 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.12■□□□□ 0.49
HDAC3O15379 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.12■□□□□ 0.49
HDAC3O15379 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC3O15379 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HDAC3O15379 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC3O15379 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.12■□□□□ 0.49
HDAC3O15379 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.12■□□□□ 0.49
HDAC3O15379 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HDAC3O15379 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms