Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 AC112777.1-201ENST00000540175 1423 ntBASIC18.65■□□□□ 0.58
COPEO14579 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COPEO14579 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPEO14579 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPEO14579 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPEO14579 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
COPEO14579 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.64■□□□□ 0.57
COPEO14579 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COPEO14579 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.64■□□□□ 0.57
COPEO14579 NCF1B-203ENST00000435988 1254 ntBASIC18.64■□□□□ 0.57
COPEO14579 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.64■□□□□ 0.57
COPEO14579 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.64■□□□□ 0.57
COPEO14579 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.64■□□□□ 0.57
COPEO14579 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.64■□□□□ 0.57
COPEO14579 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COPEO14579 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.64■□□□□ 0.57
COPEO14579 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COPEO14579 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.64■□□□□ 0.57
COPEO14579 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.63■□□□□ 0.57
COPEO14579 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.63■□□□□ 0.57
COPEO14579 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.63■□□□□ 0.57
COPEO14579 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 KRT8P32-201ENST00000512863 1461 ntBASIC18.63■□□□□ 0.57
COPEO14579 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COPEO14579 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
COPEO14579 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COPEO14579 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
COPEO14579 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COPEO14579 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.62■□□□□ 0.57
COPEO14579 UNC93B4-201ENST00000505679 747 ntBASIC18.62■□□□□ 0.57
COPEO14579 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.62■□□□□ 0.57
COPEO14579 AC098934.4-201ENST00000564127 592 ntBASIC18.62■□□□□ 0.57
COPEO14579 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.62■□□□□ 0.57
COPEO14579 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.62■□□□□ 0.57
COPEO14579 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.62■□□□□ 0.57
COPEO14579 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
COPEO14579 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.62■□□□□ 0.57
COPEO14579 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.62■□□□□ 0.57
COPEO14579 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.62■□□□□ 0.57
COPEO14579 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.62■□□□□ 0.57
COPEO14579 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COPEO14579 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 GNAS-203ENST00000306120 1878 ntBASIC18.61■□□□□ 0.57
COPEO14579 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
COPEO14579 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPEO14579 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.61■□□□□ 0.57
COPEO14579 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms