Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 AC112777.1-201ENST00000540175 1423 ntBASIC17.25■□□□□ 0.35
TNFRSF11BO00300 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 AC083880.1-201ENST00000608266 535 ntBASIC17.25■□□□□ 0.35
TNFRSF11BO00300 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.25■□□□□ 0.35
TNFRSF11BO00300 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.24■□□□□ 0.35
TNFRSF11BO00300 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 AC004264.1-201ENST00000608354 794 ntBASIC17.24■□□□□ 0.35
TNFRSF11BO00300 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 KRT8P32-201ENST00000512863 1461 ntBASIC17.24■□□□□ 0.35
TNFRSF11BO00300 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.24■□□□□ 0.35
TNFRSF11BO00300 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TNFRSF11BO00300 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 GNAS-203ENST00000306120 1878 ntBASIC17.22■□□□□ 0.35
TNFRSF11BO00300 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 NCF1B-203ENST00000435988 1254 ntBASIC17.22■□□□□ 0.35
TNFRSF11BO00300 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 UNC93B4-201ENST00000505679 747 ntBASIC17.22■□□□□ 0.35
TNFRSF11BO00300 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 AC134043.2-201ENST00000624206 2238 ntBASIC17.22■□□□□ 0.35
TNFRSF11BO00300 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TNFRSF11BO00300 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms