Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 RCC2P3-201ENST00000418112 1537 ntBASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV27A0A087WT01 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 AC011506.1-201ENST00000474329 610 ntBASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 RARRES2P10-201ENST00000564312 460 ntBASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV27A0A087WT01 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV27A0A087WT01 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV27A0A087WT01 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV27A0A087WT01 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV27A0A087WT01 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV27A0A087WT01 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 B3GAT3P1-201ENST00000471720 806 ntBASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 MIR6786-201ENST00000616843 113 ntBASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 AC130371.2-201ENST00000619443 611 ntBASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 AL359736.2-201ENST00000621992 437 ntBASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TRAV27A0A087WT01 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRAV27A0A087WT01 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms