Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF39Q9H2S5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 BTG3P1-201ENST00000435859 716 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC114495.2-201ENST00000452686 437 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 COX11P1-201ENST00000489116 835 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 RNU6-415P-201ENST00000516252 97 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC007066.2-202ENST00000566531 914 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC064807.4-201ENST00000607201 407 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 AC104820.1-201ENST00000624183 307 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 CIR1P2-201ENST00000514821 1342 ntBASIC20.69■□□□□ 0.9
RNF39Q9H2S5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF39Q9H2S5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 HMGN1P6-201ENST00000438508 291 ntBASIC20.68■□□□□ 0.9
RNF39Q9H2S5 RPSAP41-201ENST00000439695 860 ntBASIC20.68■□□□□ 0.9
RNF39Q9H2S5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 ZNF971P-201ENST00000562068 1249 ntBASIC20.68■□□□□ 0.9
RNF39Q9H2S5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 MIR4674-201ENST00000582457 87 ntBASIC20.68■□□□□ 0.9
RNF39Q9H2S5 AC008622.2-201ENST00000617006 1229 ntBASIC20.68■□□□□ 0.9
RNF39Q9H2S5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF39Q9H2S5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 RNF152P1-201ENST00000397754 604 ntBASIC20.67■□□□□ 0.9
RNF39Q9H2S5 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 AC022616.7-201ENST00000525383 220 ntBASIC20.67■□□□□ 0.9
RNF39Q9H2S5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RNF39Q9H2S5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF39Q9H2S5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms