RNA–Protein interactions for RNA: ENST00000557691.1

AC004816.1-202, humanhuman

TSL 2 BASIC

Gene AC004816.1, Length 629 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004816.1-202ENST00000557691 AEBP2Q6ZN18 517 aaPredicted RBP31.98■■■□□ 2.71
AC004816.1-202ENST00000557691 CHIC1Q5VXU3 224 aa29.88■■■□□ 2.37
AC004816.1-202ENST00000557691 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
AC004816.1-202ENST00000557691 PHF23Q9BUL5 403 aaPredicted RBP26.94■■□□□ 1.9
AC004816.1-202ENST00000557691 FOXD1Q16676 465 aa25.66■■□□□ 1.7
AC004816.1-202ENST00000557691 POTEDQ86YR6 584 aa25.25■■□□□ 1.63
AC004816.1-202ENST00000557691 MSH5O43196 834 aa24.35■■□□□ 1.49
AC004816.1-202ENST00000557691 PIAS4Q8N2W9 510 aaPredicted RBP23.79■■□□□ 1.4
AC004816.1-202ENST00000557691 PPP6R1Q9UPN7 881 aa23.32■■□□□ 1.32
AC004816.1-202ENST00000557691 ADRA2BP18089 450 aa23.21■■□□□ 1.31
AC004816.1-202ENST00000557691 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
AC004816.1-202ENST00000557691 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
AC004816.1-202ENST00000557691 MAPK8IP2Q13387 824 aaPredicted RBP21.58■■□□□ 1.05
AC004816.1-202ENST00000557691 CACNB1Q02641 598 aaPredicted RBP21.45■■□□□ 1.02
AC004816.1-202ENST00000557691 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
AC004816.1-202ENST00000557691 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
AC004816.1-202ENST00000557691 RNF39Q9H2S5 420 aa20.69■□□□□ 0.9
AC004816.1-202ENST00000557691 HOXD11P31277 338 aaPredicted RBP20.45■□□□□ 0.86
AC004816.1-202ENST00000557691 C1QBPQ07021 282 aaKnown RBP20.34■□□□□ 0.85
AC004816.1-202ENST00000557691 PPP4R3CPQ6ZMV5 832 aa20.23■□□□□ 0.83
AC004816.1-202ENST00000557691 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
AC004816.1-202ENST00000557691 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
AC004816.1-202ENST00000557691 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
AC004816.1-202ENST00000557691 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
AC004816.1-202ENST00000557691 POTEHQ6S545 545 aa19.62■□□□□ 0.73
AC004816.1-202ENST00000557691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.72
AC004816.1-202ENST00000557691 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
AC004816.1-202ENST00000557691 DSG3P32926 999 aa19.09■□□□□ 0.65
AC004816.1-202ENST00000557691 CAPN15O75808 1086 aa19.02■□□□□ 0.64
AC004816.1-202ENST00000557691 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
AC004816.1-202ENST00000557691 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
AC004816.1-202ENST00000557691 NPM3O75607 178 aaKnown RBP18.91■□□□□ 0.62
AC004816.1-202ENST00000557691 ABCB7O75027 752 aa18.51■□□□□ 0.55
AC004816.1-202ENST00000557691 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
AC004816.1-202ENST00000557691 ZNF219Q9P2Y4 722 aaPredicted RBP18.42■□□□□ 0.54
AC004816.1-202ENST00000557691 APLP2Q06481 763 aa18.4■□□□□ 0.54
AC004816.1-202ENST00000557691 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
AC004816.1-202ENST00000557691 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
AC004816.1-202ENST00000557691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.2■□□□□ 0.5
AC004816.1-202ENST00000557691 HNRNPUL2Q1KMD3 747 aaKnown RBP18.2■□□□□ 0.5
AC004816.1-202ENST00000557691 CHRDL2Q6WN34 429 aa18.19■□□□□ 0.5
AC004816.1-202ENST00000557691 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
AC004816.1-202ENST00000557691 SP7Q8TDD2 431 aaPredicted RBP17.99■□□□□ 0.47
AC004816.1-202ENST00000557691 KCNA4P22459 653 aa17.88■□□□□ 0.45
AC004816.1-202ENST00000557691 POLA2Q14181 598 aa17.79■□□□□ 0.44
AC004816.1-202ENST00000557691 CCDC180Q9P1Z9 1646 aa17.64■□□□□ 0.41
AC004816.1-202ENST00000557691 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
AC004816.1-202ENST00000557691 PIP4P2Q8N4L2 257 aa17.57■□□□□ 0.4
AC004816.1-202ENST00000557691 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
AC004816.1-202ENST00000557691 HAX1O00165 279 aa17.5■□□□□ 0.39
AC004816.1-202ENST00000557691 REM2Q8IYK8 340 aaPredicted RBP17.48■□□□□ 0.39
AC004816.1-202ENST00000557691 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
AC004816.1-202ENST00000557691 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
AC004816.1-202ENST00000557691 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
AC004816.1-202ENST00000557691 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
AC004816.1-202ENST00000557691 ABCC9O60706 1549 aa17.26■□□□□ 0.35
AC004816.1-202ENST00000557691 EVX2Q03828 476 aa17.2■□□□□ 0.34
AC004816.1-202ENST00000557691 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
AC004816.1-202ENST00000557691 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
AC004816.1-202ENST00000557691 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
AC004816.1-202ENST00000557691 LHX8Q68G74 356 aa16.86■□□□□ 0.29
AC004816.1-202ENST00000557691 C19orf67A6NJJ6 358 aa16.79■□□□□ 0.28
AC004816.1-202ENST00000557691 SLC4A1APQ9BWU0 796 aaKnown RBP16.79■□□□□ 0.28
AC004816.1-202ENST00000557691 GABBR2O75899 941 aa16.77■□□□□ 0.28
AC004816.1-202ENST00000557691 DCAF8L2P0C7V8 631 aa16.76■□□□□ 0.27
AC004816.1-202ENST00000557691 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
AC004816.1-202ENST00000557691 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
AC004816.1-202ENST00000557691 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
AC004816.1-202ENST00000557691 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
AC004816.1-202ENST00000557691 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
AC004816.1-202ENST00000557691 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
AC004816.1-202ENST00000557691 ATXN8OSP0DMR3 200 aa16.6■□□□□ 0.25
AC004816.1-202ENST00000557691 FBLN2P98095 1184 aa16.6■□□□□ 0.25
AC004816.1-202ENST00000557691 NACADO15069 1562 aa16.55■□□□□ 0.24
AC004816.1-202ENST00000557691 PLSCR2Q9NRY7 297 aa16.55■□□□□ 0.24
AC004816.1-202ENST00000557691 CHADLQ6NUI6 762 aa16.49■□□□□ 0.23
AC004816.1-202ENST00000557691 ZCCHC6Q5VYS8 1495 aaKnown RBP16.48■□□□□ 0.23
AC004816.1-202ENST00000557691 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
AC004816.1-202ENST00000557691 SSUH2Q9Y2M2 353 aa16.43■□□□□ 0.22
AC004816.1-202ENST00000557691 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
AC004816.1-202ENST00000557691 ZBTB22O15209 634 aa16.38■□□□□ 0.21
AC004816.1-202ENST00000557691 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
AC004816.1-202ENST00000557691 MKRN4PQ13434 485 aaPredicted RBP16.33■□□□□ 0.2
AC004816.1-202ENST00000557691 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
AC004816.1-202ENST00000557691 PRR29P0C7W0 189 aa16.31■□□□□ 0.2
AC004816.1-202ENST00000557691 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
AC004816.1-202ENST00000557691 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
AC004816.1-202ENST00000557691 CLCN6P51797 869 aa16.18■□□□□ 0.18
AC004816.1-202ENST00000557691 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC004816.1-202ENST00000557691 DCBLD2Q96PD2 775 aa16.16■□□□□ 0.18
AC004816.1-202ENST00000557691 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
AC004816.1-202ENST00000557691 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
AC004816.1-202ENST00000557691 BICRAQ9NZM4 1560 aa15.98■□□□□ 0.15
AC004816.1-202ENST00000557691 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
AC004816.1-202ENST00000557691 OTUD5Q96G74 571 aa15.96■□□□□ 0.15
AC004816.1-202ENST00000557691 POTEMA6NI47 508 aa15.93■□□□□ 0.14
AC004816.1-202ENST00000557691 ZRANB1Q9UGI0 708 aa15.92■□□□□ 0.14
AC004816.1-202ENST00000557691 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
AC004816.1-202ENST00000557691 POTEGQ6S5H5 508 aa15.86■□□□□ 0.13
AC004816.1-202ENST00000557691 POTEB2H3BUK9 544 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms