Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.64■■□□□ 1.21
RPAP1Q9BWH6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 SPDYE13P-201ENST00000445314 798 ntBASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 AL121894.2-201ENST00000602977 491 ntBASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RPAP1Q9BWH6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
RPAP1Q9BWH6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 LINC01311-201ENST00000565162 1445 ntBASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.61■■□□□ 1.21
RPAP1Q9BWH6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 AL512353.2-201ENST00000448759 1962 ntBASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 AL450487.1-201ENST00000426799 995 ntBASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 ATP5G2P1-201ENST00000433580 426 ntBASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.6■■□□□ 1.21
RPAP1Q9BWH6 CLEC4GP1-201ENST00000596555 870 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms