Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.85□□□□□ -0.03
RNF2Q99496 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 GOLGA6L3-201ENST00000507199 1679 ntBASIC14.85□□□□□ -0.03
RNF2Q99496 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 POU5F1P3-201ENST00000428824 1078 ntBASIC14.85□□□□□ -0.03
RNF2Q99496 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF2Q99496 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
RNF2Q99496 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.85□□□□□ -0.03
RNF2Q99496 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.85□□□□□ -0.03
RNF2Q99496 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF2Q99496 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 CROCCP1-201ENST00000426910 5675 ntBASIC14.84□□□□□ -0.03
RNF2Q99496 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RNF2Q99496 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.84□□□□□ -0.03
RNF2Q99496 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.84□□□□□ -0.03
RNF2Q99496 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.84□□□□□ -0.03
RNF2Q99496 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 PRORSD1P-202ENST00000563365 2154 ntBASIC14.84□□□□□ -0.03
RNF2Q99496 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF2Q99496 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.83□□□□□ -0.03
RNF2Q99496 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNF2Q99496 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF2Q99496 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.83□□□□□ -0.03
RNF2Q99496 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF2Q99496 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RNF2Q99496 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF2Q99496 AC073592.3-201ENST00000625118 1834 ntBASIC14.83□□□□□ -0.04
RNF2Q99496 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF2Q99496 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms