Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
CDK5RAP1Q96SZ6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CDK5RAP1Q96SZ6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 HBZP1-201ENST00000354915 429 ntBASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 AL157888.1-201ENST00000631930 593 ntBASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.33■□□□□ 0.68
CDK5RAP1Q96SZ6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 FAM86EP-206ENST00000510506 987 ntBASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 VENTXP5-201ENST00000523979 775 ntBASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AC083849.1-201ENST00000615227 514 ntBASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AP000550.4-202ENST00000639755 178 ntBASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 AC112777.1-201ENST00000540175 1423 ntBASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDK5RAP1Q96SZ6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDK5RAP1Q96SZ6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms