Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMARCD1Q96GM5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 AP000593.1-201ENST00000393668 712 ntBASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 AL031133.1-201ENST00000406807 723 ntBASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 MIR3180-4-201ENST00000582223 153 ntBASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.61■□□□□ 0.73
SMARCD1Q96GM5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AC120498.9-201ENST00000339021 3867 ntBASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AL157888.1-201ENST00000631930 593 ntBASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
SMARCD1Q96GM5 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 HYMAI.1-201ENST00000620949 238 ntBASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMARCD1Q96GM5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.58■□□□□ 0.73
SMARCD1Q96GM5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 AC009065.1-201ENST00000564055 1225 ntBASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 AL121956.5-201ENST00000625261 221 ntBASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMARCD1Q96GM5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 AC093525.10-201ENST00000625130 1569 ntBASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms