Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM11Q96F44 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM11Q96F44 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AP000593.1-201ENST00000393668 712 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AC008556.1-201ENST00000610908 2040 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 REXO1L10P-201ENST00000615707 1290 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 AC008622.2-201ENST00000617006 1229 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 REXO1L12P-201ENST00000622156 912 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM11Q96F44 AC090340.1-201ENST00000620778 4980 ntBASIC19.72■□□□□ 0.75
TRIM11Q96F44 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 AL023284.2-201ENST00000405850 579 ntBASIC19.71■□□□□ 0.75
TRIM11Q96F44 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 AC026471.5-201ENST00000615068 467 ntBASIC19.71■□□□□ 0.75
TRIM11Q96F44 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM11Q96F44 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM11Q96F44 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 ABALON-201ENST00000629058 1903 ntBASIC19.7■□□□□ 0.74
TRIM11Q96F44 MYLKP1-201ENST00000509077 1580 ntBASIC19.7■□□□□ 0.74
TRIM11Q96F44 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 MIR564-202ENST00000385049 94 ntBASIC19.7■□□□□ 0.74
TRIM11Q96F44 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 AP005242.2-201ENST00000580065 1175 ntBASIC19.7■□□□□ 0.74
TRIM11Q96F44 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM11Q96F44 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM11Q96F44 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms