Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATL1Q8WXF7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
ATL1Q8WXF7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 AL023284.2-201ENST00000405850 579 ntBASIC18.2■□□□□ 0.5
ATL1Q8WXF7 MIR1238-201ENST00000408483 83 ntBASIC18.2■□□□□ 0.5
ATL1Q8WXF7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 AC112777.1-201ENST00000540175 1423 ntBASIC18.2■□□□□ 0.5
ATL1Q8WXF7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATL1Q8WXF7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AL357033.4-201ENST00000617703 1807 ntBASIC18.19■□□□□ 0.5
ATL1Q8WXF7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AC093827.2-201ENST00000512654 315 ntBASIC18.19■□□□□ 0.5
ATL1Q8WXF7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AC116562.4-202ENST00000641738 218 ntBASIC18.19■□□□□ 0.5
ATL1Q8WXF7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATL1Q8WXF7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 WIZP1-201ENST00000531444 2299 ntBASIC18.18■□□□□ 0.5
ATL1Q8WXF7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.18■□□□□ 0.5
ATL1Q8WXF7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 AL353719.1-201ENST00000566847 864 ntBASIC18.18■□□□□ 0.5
ATL1Q8WXF7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 AL023803.3-201ENST00000615559 522 ntBASIC18.18■□□□□ 0.5
ATL1Q8WXF7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
ATL1Q8WXF7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATL1Q8WXF7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms