Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 AL162412.1-201ENST00000567129 965 ntBASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TERF1P2-201ENST00000583350 1212 ntBASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 LINC02228-203ENST00000641970 1355 ntBASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SMIM11BQ8TCY0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 COX20-201ENST00000366528 568 ntTSL 2 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SMIM11BQ8TCY0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 AL139384.1-201ENST00000612143 3047 ntBASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 AC093677.2-201ENST00000600169 1863 ntBASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 TERF1P5-201ENST00000477545 1207 ntBASIC12.11□□□□□ -0.47
SMIM11BQ8TCY0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms