Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 AL353719.1-201ENST00000566847 864 ntBASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 AC145285.6-201ENST00000604632 637 ntBASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 AC097493.4-201ENST00000641197 219 ntBASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 AC116562.4-202ENST00000641738 218 ntBASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 AC067852.2-201ENST00000590513 2313 ntBASIC18.31■□□□□ 0.52
HMGCLL1Q8TB92 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 AC010653.2-201ENST00000623505 997 ntBASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGCLL1Q8TB92 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 AC128688.1-201ENST00000487626 519 ntBASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 AP000997.3-201ENST00000623333 2250 ntBASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLL1Q8TB92 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLL1Q8TB92 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms